CDS
| Accession Number | TCMCG066C18795 |
| gbkey | CDS |
| Protein Id | XP_034594513.1 |
| Location | join(9622851..9622991,9623097..9623228,9623307..9623456,9623552..9623572,9623668..9623875,9623986..9624067,9624165..9624270,9624404..9624522,9624614..9624632) |
| Gene | LOC117856208 |
| GeneID | 117856208 |
| Organism | Setaria viridis |
Protein
| Length | 325aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA633601 |
| db_source | XM_034738622.1 |
| Definition | probable polygalacturonase At3g15720 [Setaria viridis] |
EGGNOG-MAPPER Annotation
| COG_category | G |
| Description | Glycosyl hydrolases family 28 |
| KEGG_TC | - |
| KEGG_Module |
M00081
[VIEW IN KEGG] |
| KEGG_Reaction |
R01982
[VIEW IN KEGG] R02360 [VIEW IN KEGG] R07413 [VIEW IN KEGG] |
| KEGG_rclass |
RC00049
[VIEW IN KEGG] |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko00002 [VIEW IN KEGG] ko01000 [VIEW IN KEGG] |
| KEGG_ko |
ko:K01184
[VIEW IN KEGG] ko:K01213 [VIEW IN KEGG] |
| EC |
3.2.1.15
[VIEW IN KEGG]
[VIEW IN INGREDIENT] 3.2.1.67 [VIEW IN KEGG] [VIEW IN INGREDIENT] |
| KEGG_Pathway |
ko00040
[VIEW IN KEGG] ko01100 [VIEW IN KEGG] map00040 [VIEW IN KEGG] map01100 [VIEW IN KEGG] |
| GOs | - |
Sequence
| CDS: ATGGAGACATCTGCAGTAAGGCATATCATCATCCTGCTGCTTGTGCTGCTGGTCCTTCGATCATCAGCACTAGGCCAGAATCAGATCTACAACGTCCTCAACTTCCATGCGCATGGGGATGGCAAGAGAGATGATGCACAGGCGTTCTTGGCGGCGTGGCAAGCGGTTTGCGGCGACCAGCGCACGGCGATCATGGTCGTCCCGGCAGGAAGGACGTTCTTGCTGAACCAGGTTTCGTTTCAGGGTCCCTGCAAGTCACCGGTCACAGTACAGCTGGATGGCAACGTTGTGGCACCAAACCACATTTGGACAAGAAAATCTGCCAACCTCCTGACCTTCCTCGGCGTCGACGACTTGACGATGGATGGTAATGGTGAGATCGACGGCCAAGGCGCCATCTGGTGGGATTGCTATAACCGAAAGAGATGCGACAACCGCCCTATTTTGCTGGGTTTCGCACGGTGTAACAATCTAAAGGTGAGGAGGATACATCTGAAGAACAGTGCAGACAAGCACATGACCTTGTTCCAGTGCAGCCAGGTGAGTGTGGACAACGTCTCCATAACTGCCCCAGCTGATAGCCCCAACACAGACGGCATAACTGTTGCATTTTCTAACAACACCTACATCTCCAACTGCTCTATCCAAACAGGAGATGACTGTGTATCAGTCCTATCATTCACCAAAAATGTTACTGTCACTACCAGCAGGTGTGGGCCTGGTCATGGCATCAGTGTGGGGAGTCTGGGAAGATCTGAGACAGCGATGGTGGAACAAATTACGGTATCTAATTGCAGCTTTGTTGGGACTATGACTGGTGTGAGGATCAAATCCTGGCAGGGTGGGAAGGGCTATGCAAAAGGATTCCTTTTTGAGAGCCTCAACATGACTGAAGTTCAGTATCCTATTGTCATTGACCAGTTCTACTGTCCACAGGGAAATTGTCCTAGAAAGGTCAGCACGGTGGTGTGGCAATAA |
| Protein: METSAVRHIIILLLVLLVLRSSALGQNQIYNVLNFHAHGDGKRDDAQAFLAAWQAVCGDQRTAIMVVPAGRTFLLNQVSFQGPCKSPVTVQLDGNVVAPNHIWTRKSANLLTFLGVDDLTMDGNGEIDGQGAIWWDCYNRKRCDNRPILLGFARCNNLKVRRIHLKNSADKHMTLFQCSQVSVDNVSITAPADSPNTDGITVAFSNNTYISNCSIQTGDDCVSVLSFTKNVTVTTSRCGPGHGISVGSLGRSETAMVEQITVSNCSFVGTMTGVRIKSWQGGKGYAKGFLFESLNMTEVQYPIVIDQFYCPQGNCPRKVSTVVWQ |